BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037E09SP1|AL430405
(885 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1654 1699 0.0
>3x_Contig1654
Length = 17174
Score = 1699 bits (854), Expect = 0.0
Identities = 878/887 (98%), Gaps = 3/887 (0%)
Strand = Plus / Minus
Query: 1 cagccagtgtttgaatcatacagggctctcggactttcttaatatatacaagcgamk--k 58
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10066 cagccagtgtttgaatcatacagggctctcggactttcttaatatatacaagcgaagctt 10007
Query: 59 aacngcaaaatgatgtgagcctagccgttcttcttgatctaatgtcaaccgatgtgtgtt 118
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10006 gac-gcaaaatgatgtgagcctagccgttcttcttgatctaatgtcaaccgatgtgtgtt 9948
Query: 119 gatgccaaaacttcaatggcctgtttaaagggaactaggaaaattgatgtccgggtaata 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9947 gatgccaaaacttcaatggcctgtttaaagggaactaggaaaattgatgtccgggtaata 9888
Query: 179 ctttacggtggcgaaatttgggaaagtcaatataaagaatcaatggtaagaggttgagaa 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9887 ctttacggtggcgaaatttgggaaagtcaatataaagaatcaatggtaagaggttgagaa 9828
Query: 239 taactaagtcttgtgtagacgcaaatcaagggcttgggtaaaagatacttcacacagata 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9827 taactaagtcttgtgtagacgcaaatcaagggcttgggtaaaagatacttcacacagata 9768
Query: 299 atcagcagctgttgagactctgacattgttcaattcaaacaggcaattcaatagcttttc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9767 atcagcagctgttgagactctgacattgttcaattcaaacaggcaattcaatagcttttc 9708
Query: 359 ataaaatggtatgtgaatattcattccgatgcttggaatgctttagtttcccttttcctt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9707 ataaaatggtatgtgaatattcattccgatgcttggaatgctttagtttcccttttcctt 9648
Query: 419 tgagtttaatttatgcctttaggataagaatctatgaataatgcaattaaattactaacg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9647 tgagtttaatttatgcctttaggataagaatctatgaataatgcaattaaattactaacg 9588
Query: 479 cgttcaatccaattttcactgattgggatgatgttttattttcattctagacatcaatag 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9587 cgttcaatccaattttcactgattgggatgatgttttattttcattctagacatcaatag 9528
Query: 539 gtactggttacgatctttctaatagtgttttttctccggatggtaggaactttcaagttg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9527 gtactggttacgatctttctaatagtgttttttctccggatggtaggaactttcaagttg 9468
Query: 599 agtatgcggtgaaggcggtagagaacggctccacttctctgggtataaagtgtgaagacg 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9467 agtatgcggtgaaggcggtagagaacggctccacttctctgggtataaagtgtgaagacg 9408
Query: 659 gtgtcgtgttagctgttgaaaaactcattacttccaagcttctagtgccgggcaagaaca 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9407 gtgtcgtgttagctgttgaaaaactcattacttccaagcttctagtgccgggcaagaaca 9348
Query: 719 agaagattcagacagtggatcgtcatatcgggtgcgtatattccgggttgatgcctgatg 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9347 agaagattcagacagtggatcgtcatatcgggtgcgtatattccgggttgatgcctgatg 9288
Query: 779 gtagamatttggtgaacagaggtcgtgaaraagctgccagcttcaagaaaatgtacagca 838
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9287 gtagacatttggtgaacagaggtcgtgaagaagctgccagcttcaagaaaatgtacagca 9228
Query: 839 caccaattccaatccctgcatttgctgaccgtgtcggccaatatgtt 885
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9227 caccaattccaatccctgcatttgctgaccgtgtcggccaatatgtt 9181
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6438
Number of Sequences: 1807
Number of extensions: 6438
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 1
length of query: 885
length of database: 10,358,551
effective HSP length: 16
effective length of query: 869
effective length of database: 10,329,639
effective search space: 8976456291
effective search space used: 8976456291
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)